BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003C09SP1|AL425097
(919 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1797 1784 0.0
>3x_Contig1797
Length = 34782
Score = 1784 bits (895), Expect = 0.0
Identities = 910/919 (99%), Gaps = 1/919 (0%)
Strand = Plus / Plus
Query: 1 acccgtagtcttgagagcatcaaggkagtattagacacatttacaattagttgaggaatg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 511 acccgtagtcttgagagcatcaaggtagtattagacacatttacaattagttgaggaatg 570
Query: 61 ttgtggagtactgtgcccctgcatgcctttcaggtaaatgtttccgtgaacatccttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttgtggagtactgtgcccctgcatgcctttcaggtaaatgtttccgtgaacatccttcat 630
Query: 121 accttttttttttttttcatttttagatatataaaaataaaaagttgactttggctaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 accttttttttttttttcatttttagatatataaaaataaaaagttgactttggctaggg 690
Query: 181 aatcactcgcttgctctacgtttcgaagcagaactgtcgatggaagaggttacggagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aatcactcgcttgctctacgtttcgaagcagaactgtcgatggaagaggttacggagaca 750
Query: 241 tgaattatcagcgtagtgtttagccataaaccgcagaaaacaaattccaatatatttmaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 751 tgaattatcagcgtagtgtttagccataaaccgcagaaaacaaattccaatatatttaaa 810
Query: 301 taatccacatggtttcagtatgagtggacgtttgcttacattagaggaaatatgtgtcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 taatccacatggtttcagtatgagtggacgtttgcttacattagaggaaatatgtgtcat 870
Query: 361 cacattacytcgacatcacactttaattgaagacatcagttatattccctataggctaat 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 cacattacttcgacatcacactttaattgaagacatcagttatattccctataggctaat 930
Query: 421 taaaagtgtcttatctaaattgaaagtggatcaactcacgaaattagaacagactaatcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 taaaagtgtcttatctaaattgaaagtggatcaactcacgaaattagaacagactaatcc 990
Query: 481 cttgattatctttgaagacgatgaaatctggkgcgatttaatcagaagagacgtcgatcc 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 991 cttgattatctttgaagacgatgaaatctggtgcgatttaatcagaagagacgtcgatcc 1050
Query: 541 aacgtttagttatcaatacacaaacaagaagaatgagatacttcaatattttvmacgtgt 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1051 aacgtttagttatcaatacacaaacaagaagaatgagatacttcaatattttaaacgtgt 1110
Query: 601 gataacgcaactacacaggcacaagtacatacaaaaatattgatacggagacgctaaaga 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 gataacg-aactacacaggcacaagtacatacaaaaatattgatacggagacgctaaaga 1169
Query: 661 rttttgtacgaccaatagtgacaaagaacgatagaggcctttatcgggttccttgtcgac 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 attttgtacgaccaatagtgacaaagaacgatagaggcctttatcgggttccttgtcgac 1229
Query: 721 tagtttatgaaaaaatgagggaagagattttagagaaggataaaagaatcgctgccaagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 tagtttatgaaaaaatgagggaagagattttagagaaggataaaagaatcgctgccaagg 1289
Query: 781 taagagaaacaacaaaaaggattcaacaagagaaaaataagattcagatcactgcaatgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 taagagaaacaacaaaaaggattcaacaagagaaaaataagattcagatcactgcaatgg 1349
Query: 841 ttgagcctgtttctggcgtttccagtaggcttaggmacaagtttttagaatccaaatcta 900
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1350 ttgagcctgtttctggcgtttccagtaggcttaggaacaagtttttagaatccaaatcta 1409
Query: 901 aagtatttgttgattcttt 919
|||||||||||||||||||
Sbjct: 1410 aagtatttgttgattcttt 1428
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,770
Number of Sequences: 1807
Number of extensions: 15770
Number of successful extensions: 409
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)